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- import io
- from types import SimpleNamespace
- import numpy as np
- from numpy.testing import assert_array_equal, assert_array_almost_equal
- import pytest
- import matplotlib as mpl
- import matplotlib.pyplot as plt
- import matplotlib.collections as mcollections
- import matplotlib.transforms as mtransforms
- from matplotlib.collections import (Collection, LineCollection,
- EventCollection, PolyCollection)
- from matplotlib.testing.decorators import image_comparison
- def generate_EventCollection_plot():
- """Generate the initial collection and plot it."""
- positions = np.array([0., 1., 2., 3., 5., 8., 13., 21.])
- extra_positions = np.array([34., 55., 89.])
- orientation = 'horizontal'
- lineoffset = 1
- linelength = .5
- linewidth = 2
- color = [1, 0, 0, 1]
- linestyle = 'solid'
- antialiased = True
- coll = EventCollection(positions,
- orientation=orientation,
- lineoffset=lineoffset,
- linelength=linelength,
- linewidth=linewidth,
- color=color,
- linestyle=linestyle,
- antialiased=antialiased
- )
- fig = plt.figure()
- ax = fig.add_subplot(1, 1, 1)
- ax.add_collection(coll)
- ax.set_title('EventCollection: default')
- props = {'positions': positions,
- 'extra_positions': extra_positions,
- 'orientation': orientation,
- 'lineoffset': lineoffset,
- 'linelength': linelength,
- 'linewidth': linewidth,
- 'color': color,
- 'linestyle': linestyle,
- 'antialiased': antialiased
- }
- ax.set_xlim(-1, 22)
- ax.set_ylim(0, 2)
- return ax, coll, props
- @image_comparison(['EventCollection_plot__default'])
- def test__EventCollection__get_props():
- _, coll, props = generate_EventCollection_plot()
- # check that the default segments have the correct coordinates
- check_segments(coll,
- props['positions'],
- props['linelength'],
- props['lineoffset'],
- props['orientation'])
- # check that the default positions match the input positions
- np.testing.assert_array_equal(props['positions'], coll.get_positions())
- # check that the default orientation matches the input orientation
- assert props['orientation'] == coll.get_orientation()
- # check that the default orientation matches the input orientation
- assert coll.is_horizontal()
- # check that the default linelength matches the input linelength
- assert props['linelength'] == coll.get_linelength()
- # check that the default lineoffset matches the input lineoffset
- assert props['lineoffset'] == coll.get_lineoffset()
- # check that the default linestyle matches the input linestyle
- assert coll.get_linestyle() == [(0, None)]
- # check that the default color matches the input color
- for color in [coll.get_color(), *coll.get_colors()]:
- np.testing.assert_array_equal(color, props['color'])
- @image_comparison(['EventCollection_plot__set_positions'])
- def test__EventCollection__set_positions():
- splt, coll, props = generate_EventCollection_plot()
- new_positions = np.hstack([props['positions'], props['extra_positions']])
- coll.set_positions(new_positions)
- np.testing.assert_array_equal(new_positions, coll.get_positions())
- check_segments(coll, new_positions,
- props['linelength'],
- props['lineoffset'],
- props['orientation'])
- splt.set_title('EventCollection: set_positions')
- splt.set_xlim(-1, 90)
- @image_comparison(['EventCollection_plot__add_positions'])
- def test__EventCollection__add_positions():
- splt, coll, props = generate_EventCollection_plot()
- new_positions = np.hstack([props['positions'],
- props['extra_positions'][0]])
- coll.switch_orientation() # Test adding in the vertical orientation, too.
- coll.add_positions(props['extra_positions'][0])
- coll.switch_orientation()
- np.testing.assert_array_equal(new_positions, coll.get_positions())
- check_segments(coll,
- new_positions,
- props['linelength'],
- props['lineoffset'],
- props['orientation'])
- splt.set_title('EventCollection: add_positions')
- splt.set_xlim(-1, 35)
- @image_comparison(['EventCollection_plot__append_positions'])
- def test__EventCollection__append_positions():
- splt, coll, props = generate_EventCollection_plot()
- new_positions = np.hstack([props['positions'],
- props['extra_positions'][2]])
- coll.append_positions(props['extra_positions'][2])
- np.testing.assert_array_equal(new_positions, coll.get_positions())
- check_segments(coll,
- new_positions,
- props['linelength'],
- props['lineoffset'],
- props['orientation'])
- splt.set_title('EventCollection: append_positions')
- splt.set_xlim(-1, 90)
- @image_comparison(['EventCollection_plot__extend_positions'])
- def test__EventCollection__extend_positions():
- splt, coll, props = generate_EventCollection_plot()
- new_positions = np.hstack([props['positions'],
- props['extra_positions'][1:]])
- coll.extend_positions(props['extra_positions'][1:])
- np.testing.assert_array_equal(new_positions, coll.get_positions())
- check_segments(coll,
- new_positions,
- props['linelength'],
- props['lineoffset'],
- props['orientation'])
- splt.set_title('EventCollection: extend_positions')
- splt.set_xlim(-1, 90)
- @image_comparison(['EventCollection_plot__switch_orientation'])
- def test__EventCollection__switch_orientation():
- splt, coll, props = generate_EventCollection_plot()
- new_orientation = 'vertical'
- coll.switch_orientation()
- assert new_orientation == coll.get_orientation()
- assert not coll.is_horizontal()
- new_positions = coll.get_positions()
- check_segments(coll,
- new_positions,
- props['linelength'],
- props['lineoffset'], new_orientation)
- splt.set_title('EventCollection: switch_orientation')
- splt.set_ylim(-1, 22)
- splt.set_xlim(0, 2)
- @image_comparison(['EventCollection_plot__switch_orientation__2x'])
- def test__EventCollection__switch_orientation_2x():
- """
- Check that calling switch_orientation twice sets the orientation back to
- the default.
- """
- splt, coll, props = generate_EventCollection_plot()
- coll.switch_orientation()
- coll.switch_orientation()
- new_positions = coll.get_positions()
- assert props['orientation'] == coll.get_orientation()
- assert coll.is_horizontal()
- np.testing.assert_array_equal(props['positions'], new_positions)
- check_segments(coll,
- new_positions,
- props['linelength'],
- props['lineoffset'],
- props['orientation'])
- splt.set_title('EventCollection: switch_orientation 2x')
- @image_comparison(['EventCollection_plot__set_orientation'])
- def test__EventCollection__set_orientation():
- splt, coll, props = generate_EventCollection_plot()
- new_orientation = 'vertical'
- coll.set_orientation(new_orientation)
- assert new_orientation == coll.get_orientation()
- assert not coll.is_horizontal()
- check_segments(coll,
- props['positions'],
- props['linelength'],
- props['lineoffset'],
- new_orientation)
- splt.set_title('EventCollection: set_orientation')
- splt.set_ylim(-1, 22)
- splt.set_xlim(0, 2)
- @image_comparison(['EventCollection_plot__set_linelength'])
- def test__EventCollection__set_linelength():
- splt, coll, props = generate_EventCollection_plot()
- new_linelength = 15
- coll.set_linelength(new_linelength)
- assert new_linelength == coll.get_linelength()
- check_segments(coll,
- props['positions'],
- new_linelength,
- props['lineoffset'],
- props['orientation'])
- splt.set_title('EventCollection: set_linelength')
- splt.set_ylim(-20, 20)
- @image_comparison(['EventCollection_plot__set_lineoffset'])
- def test__EventCollection__set_lineoffset():
- splt, coll, props = generate_EventCollection_plot()
- new_lineoffset = -5.
- coll.set_lineoffset(new_lineoffset)
- assert new_lineoffset == coll.get_lineoffset()
- check_segments(coll,
- props['positions'],
- props['linelength'],
- new_lineoffset,
- props['orientation'])
- splt.set_title('EventCollection: set_lineoffset')
- splt.set_ylim(-6, -4)
- @image_comparison([
- 'EventCollection_plot__set_linestyle',
- 'EventCollection_plot__set_linestyle',
- 'EventCollection_plot__set_linewidth',
- ])
- def test__EventCollection__set_prop():
- for prop, value, expected in [
- ('linestyle', 'dashed', [(0, (6.0, 6.0))]),
- ('linestyle', (0, (6., 6.)), [(0, (6.0, 6.0))]),
- ('linewidth', 5, 5),
- ]:
- splt, coll, _ = generate_EventCollection_plot()
- coll.set(**{prop: value})
- assert plt.getp(coll, prop) == expected
- splt.set_title(f'EventCollection: set_{prop}')
- @image_comparison(['EventCollection_plot__set_color'])
- def test__EventCollection__set_color():
- splt, coll, _ = generate_EventCollection_plot()
- new_color = np.array([0, 1, 1, 1])
- coll.set_color(new_color)
- for color in [coll.get_color(), *coll.get_colors()]:
- np.testing.assert_array_equal(color, new_color)
- splt.set_title('EventCollection: set_color')
- def check_segments(coll, positions, linelength, lineoffset, orientation):
- """
- Test helper checking that all values in the segment are correct, given a
- particular set of inputs.
- """
- segments = coll.get_segments()
- if (orientation.lower() == 'horizontal'
- or orientation.lower() == 'none' or orientation is None):
- # if horizontal, the position in is in the y-axis
- pos1 = 1
- pos2 = 0
- elif orientation.lower() == 'vertical':
- # if vertical, the position in is in the x-axis
- pos1 = 0
- pos2 = 1
- else:
- raise ValueError("orientation must be 'horizontal' or 'vertical'")
- # test to make sure each segment is correct
- for i, segment in enumerate(segments):
- assert segment[0, pos1] == lineoffset + linelength / 2
- assert segment[1, pos1] == lineoffset - linelength / 2
- assert segment[0, pos2] == positions[i]
- assert segment[1, pos2] == positions[i]
- def test_null_collection_datalim():
- col = mcollections.PathCollection([])
- col_data_lim = col.get_datalim(mtransforms.IdentityTransform())
- assert_array_equal(col_data_lim.get_points(),
- mtransforms.Bbox.null().get_points())
- def test_add_collection():
- # Test if data limits are unchanged by adding an empty collection.
- # GitHub issue #1490, pull #1497.
- plt.figure()
- ax = plt.axes()
- coll = ax.scatter([0, 1], [0, 1])
- ax.add_collection(coll)
- bounds = ax.dataLim.bounds
- coll = ax.scatter([], [])
- assert ax.dataLim.bounds == bounds
- def test_quiver_limits():
- ax = plt.axes()
- x, y = np.arange(8), np.arange(10)
- u = v = np.linspace(0, 10, 80).reshape(10, 8)
- q = plt.quiver(x, y, u, v)
- assert q.get_datalim(ax.transData).bounds == (0., 0., 7., 9.)
- plt.figure()
- ax = plt.axes()
- x = np.linspace(-5, 10, 20)
- y = np.linspace(-2, 4, 10)
- y, x = np.meshgrid(y, x)
- trans = mtransforms.Affine2D().translate(25, 32) + ax.transData
- plt.quiver(x, y, np.sin(x), np.cos(y), transform=trans)
- assert ax.dataLim.bounds == (20.0, 30.0, 15.0, 6.0)
- def test_barb_limits():
- ax = plt.axes()
- x = np.linspace(-5, 10, 20)
- y = np.linspace(-2, 4, 10)
- y, x = np.meshgrid(y, x)
- trans = mtransforms.Affine2D().translate(25, 32) + ax.transData
- plt.barbs(x, y, np.sin(x), np.cos(y), transform=trans)
- # The calculated bounds are approximately the bounds of the original data,
- # this is because the entire path is taken into account when updating the
- # datalim.
- assert_array_almost_equal(ax.dataLim.bounds, (20, 30, 15, 6),
- decimal=1)
- @image_comparison(['EllipseCollection_test_image.png'], remove_text=True)
- def test_EllipseCollection():
- # Test basic functionality
- fig, ax = plt.subplots()
- x = np.arange(4)
- y = np.arange(3)
- X, Y = np.meshgrid(x, y)
- XY = np.vstack((X.ravel(), Y.ravel())).T
- ww = X / x[-1]
- hh = Y / y[-1]
- aa = np.ones_like(ww) * 20 # first axis is 20 degrees CCW from x axis
- ec = mcollections.EllipseCollection(ww, hh, aa,
- units='x',
- offsets=XY,
- transOffset=ax.transData,
- facecolors='none')
- ax.add_collection(ec)
- ax.autoscale_view()
- @image_comparison(['polycollection_close.png'], remove_text=True)
- def test_polycollection_close():
- from mpl_toolkits.mplot3d import Axes3D
- vertsQuad = [
- [[0., 0.], [0., 1.], [1., 1.], [1., 0.]],
- [[0., 1.], [2., 3.], [2., 2.], [1., 1.]],
- [[2., 2.], [2., 3.], [4., 1.], [3., 1.]],
- [[3., 0.], [3., 1.], [4., 1.], [4., 0.]]]
- fig = plt.figure()
- ax = Axes3D(fig)
- colors = ['r', 'g', 'b', 'y', 'k']
- zpos = list(range(5))
- poly = mcollections.PolyCollection(
- vertsQuad * len(zpos), linewidth=0.25)
- poly.set_alpha(0.7)
- # need to have a z-value for *each* polygon = element!
- zs = []
- cs = []
- for z, c in zip(zpos, colors):
- zs.extend([z] * len(vertsQuad))
- cs.extend([c] * len(vertsQuad))
- poly.set_color(cs)
- ax.add_collection3d(poly, zs=zs, zdir='y')
- # axis limit settings:
- ax.set_xlim3d(0, 4)
- ax.set_zlim3d(0, 3)
- ax.set_ylim3d(0, 4)
- @image_comparison(['regularpolycollection_rotate.png'], remove_text=True)
- def test_regularpolycollection_rotate():
- xx, yy = np.mgrid[:10, :10]
- xy_points = np.transpose([xx.flatten(), yy.flatten()])
- rotations = np.linspace(0, 2*np.pi, len(xy_points))
- fig, ax = plt.subplots()
- for xy, alpha in zip(xy_points, rotations):
- col = mcollections.RegularPolyCollection(
- 4, sizes=(100,), rotation=alpha,
- offsets=[xy], transOffset=ax.transData)
- ax.add_collection(col, autolim=True)
- ax.autoscale_view()
- @image_comparison(['regularpolycollection_scale.png'], remove_text=True)
- def test_regularpolycollection_scale():
- # See issue #3860
- class SquareCollection(mcollections.RegularPolyCollection):
- def __init__(self, **kwargs):
- super().__init__(4, rotation=np.pi/4., **kwargs)
- def get_transform(self):
- """Return transform scaling circle areas to data space."""
- ax = self.axes
- pts2pixels = 72.0 / ax.figure.dpi
- scale_x = pts2pixels * ax.bbox.width / ax.viewLim.width
- scale_y = pts2pixels * ax.bbox.height / ax.viewLim.height
- return mtransforms.Affine2D().scale(scale_x, scale_y)
- fig, ax = plt.subplots()
- xy = [(0, 0)]
- # Unit square has a half-diagonal of `1/sqrt(2)`, so `pi * r**2` equals...
- circle_areas = [np.pi / 2]
- squares = SquareCollection(sizes=circle_areas, offsets=xy,
- transOffset=ax.transData)
- ax.add_collection(squares, autolim=True)
- ax.axis([-1, 1, -1, 1])
- def test_picking():
- fig, ax = plt.subplots()
- col = ax.scatter([0], [0], [1000], picker=True)
- fig.savefig(io.BytesIO(), dpi=fig.dpi)
- mouse_event = SimpleNamespace(x=325, y=240)
- found, indices = col.contains(mouse_event)
- assert found
- assert_array_equal(indices['ind'], [0])
- def test_linestyle_single_dashes():
- plt.scatter([0, 1, 2], [0, 1, 2], linestyle=(0., [2., 2.]))
- plt.draw()
- @image_comparison(['size_in_xy.png'], remove_text=True)
- def test_size_in_xy():
- fig, ax = plt.subplots()
- widths, heights, angles = (10, 10), 10, 0
- widths = 10, 10
- coords = [(10, 10), (15, 15)]
- e = mcollections.EllipseCollection(
- widths, heights, angles,
- units='xy',
- offsets=coords,
- transOffset=ax.transData)
- ax.add_collection(e)
- ax.set_xlim(0, 30)
- ax.set_ylim(0, 30)
- def test_pandas_indexing(pd):
- # Should not fail break when faced with a
- # non-zero indexed series
- index = [11, 12, 13]
- ec = fc = pd.Series(['red', 'blue', 'green'], index=index)
- lw = pd.Series([1, 2, 3], index=index)
- ls = pd.Series(['solid', 'dashed', 'dashdot'], index=index)
- aa = pd.Series([True, False, True], index=index)
- Collection(edgecolors=ec)
- Collection(facecolors=fc)
- Collection(linewidths=lw)
- Collection(linestyles=ls)
- Collection(antialiaseds=aa)
- @pytest.mark.style('default')
- def test_lslw_bcast():
- col = mcollections.PathCollection([])
- col.set_linestyles(['-', '-'])
- col.set_linewidths([1, 2, 3])
- assert col.get_linestyles() == [(0, None)] * 6
- assert col.get_linewidths() == [1, 2, 3] * 2
- col.set_linestyles(['-', '-', '-'])
- assert col.get_linestyles() == [(0, None)] * 3
- assert (col.get_linewidths() == [1, 2, 3]).all()
- @pytest.mark.style('default')
- def test_capstyle():
- col = mcollections.PathCollection([], capstyle='round')
- assert col.get_capstyle() == 'round'
- col.set_capstyle('butt')
- assert col.get_capstyle() == 'butt'
- @pytest.mark.style('default')
- def test_joinstyle():
- col = mcollections.PathCollection([], joinstyle='round')
- assert col.get_joinstyle() == 'round'
- col.set_joinstyle('miter')
- assert col.get_joinstyle() == 'miter'
- @image_comparison(['cap_and_joinstyle.png'])
- def test_cap_and_joinstyle_image():
- fig = plt.figure()
- ax = fig.add_subplot(1, 1, 1)
- ax.set_xlim([-0.5, 1.5])
- ax.set_ylim([-0.5, 2.5])
- x = np.array([0.0, 1.0, 0.5])
- ys = np.array([[0.0], [0.5], [1.0]]) + np.array([[0.0, 0.0, 1.0]])
- segs = np.zeros((3, 3, 2))
- segs[:, :, 0] = x
- segs[:, :, 1] = ys
- line_segments = LineCollection(segs, linewidth=[10, 15, 20])
- line_segments.set_capstyle("round")
- line_segments.set_joinstyle("miter")
- ax.add_collection(line_segments)
- ax.set_title('Line collection with customized caps and joinstyle')
- @image_comparison(['scatter_post_alpha.png'],
- remove_text=True, style='default')
- def test_scatter_post_alpha():
- fig, ax = plt.subplots()
- sc = ax.scatter(range(5), range(5), c=range(5))
- # this needs to be here to update internal state
- fig.canvas.draw()
- sc.set_alpha(.1)
- def test_pathcollection_legend_elements():
- np.random.seed(19680801)
- x, y = np.random.rand(2, 10)
- y = np.random.rand(10)
- c = np.random.randint(0, 5, size=10)
- s = np.random.randint(10, 300, size=10)
- fig, ax = plt.subplots()
- sc = ax.scatter(x, y, c=c, s=s, cmap="jet", marker="o", linewidths=0)
- h, l = sc.legend_elements(fmt="{x:g}")
- assert len(h) == 5
- assert_array_equal(np.array(l).astype(float), np.arange(5))
- colors = np.array([line.get_color() for line in h])
- colors2 = sc.cmap(np.arange(5)/4)
- assert_array_equal(colors, colors2)
- l1 = ax.legend(h, l, loc=1)
- h2, lab2 = sc.legend_elements(num=9)
- assert len(h2) == 9
- l2 = ax.legend(h2, lab2, loc=2)
- h, l = sc.legend_elements(prop="sizes", alpha=0.5, color="red")
- alpha = np.array([line.get_alpha() for line in h])
- assert_array_equal(alpha, 0.5)
- color = np.array([line.get_markerfacecolor() for line in h])
- assert_array_equal(color, "red")
- l3 = ax.legend(h, l, loc=4)
- h, l = sc.legend_elements(prop="sizes", num=4, fmt="{x:.2f}",
- func=lambda x: 2*x)
- actsizes = [line.get_markersize() for line in h]
- labeledsizes = np.sqrt(np.array(l).astype(float)/2)
- assert_array_almost_equal(actsizes, labeledsizes)
- l4 = ax.legend(h, l, loc=3)
- loc = mpl.ticker.MaxNLocator(nbins=9, min_n_ticks=9-1,
- steps=[1, 2, 2.5, 3, 5, 6, 8, 10])
- h5, lab5 = sc.legend_elements(num=loc)
- assert len(h2) == len(h5)
- levels = [-1, 0, 55.4, 260]
- h6, lab6 = sc.legend_elements(num=levels, prop="sizes", fmt="{x:g}")
- assert_array_equal(np.array(lab6).astype(float), levels[2:])
- for l in [l1, l2, l3, l4]:
- ax.add_artist(l)
- fig.canvas.draw()
- def test_EventCollection_nosort():
- # Check that EventCollection doesn't modify input in place
- arr = np.array([3, 2, 1, 10])
- coll = EventCollection(arr)
- np.testing.assert_array_equal(arr, np.array([3, 2, 1, 10]))
- def test_collection_set_verts_array():
- verts = np.arange(80, dtype=np.double).reshape(10, 4, 2)
- col_arr = PolyCollection(verts)
- col_list = PolyCollection(list(verts))
- assert len(col_arr._paths) == len(col_list._paths)
- for ap, lp in zip(col_arr._paths, col_list._paths):
- assert np.array_equal(ap._vertices, lp._vertices)
- assert np.array_equal(ap._codes, lp._codes)
- verts_tuple = np.empty(10, dtype=object)
- verts_tuple[:] = [tuple(tuple(y) for y in x) for x in verts]
- col_arr_tuple = PolyCollection(verts_tuple)
- assert len(col_arr._paths) == len(col_arr_tuple._paths)
- for ap, atp in zip(col_arr._paths, col_arr_tuple._paths):
- assert np.array_equal(ap._vertices, atp._vertices)
- assert np.array_equal(ap._codes, atp._codes)
- def test_blended_collection_autolim():
- a = [1, 2, 4]
- height = .2
- xy_pairs = np.column_stack([np.repeat(a, 2), np.tile([0, height], len(a))])
- line_segs = xy_pairs.reshape([len(a), 2, 2])
- f, ax = plt.subplots()
- trans = mtransforms.blended_transform_factory(ax.transData, ax.transAxes)
- ax.add_collection(LineCollection(line_segs, transform=trans))
- ax.autoscale_view(scalex=True, scaley=False)
- np.testing.assert_allclose(ax.get_xlim(), [1., 4.])
- def test_singleton_autolim():
- fig, ax = plt.subplots()
- ax.scatter(0, 0)
- np.testing.assert_allclose(ax.get_ylim(), [-0.06, 0.06])
- np.testing.assert_allclose(ax.get_xlim(), [-0.06, 0.06])
- def test_quadmesh_set_array():
- x = np.arange(4)
- y = np.arange(4)
- z = np.arange(9).reshape((3, 3))
- fig, ax = plt.subplots()
- coll = ax.pcolormesh(x, y, np.ones(z.shape))
- # Test that the collection is able to update with a 2d array
- coll.set_array(z)
- fig.canvas.draw()
- assert np.array_equal(coll.get_array(), z)
- # Check that pre-flattened arrays work too
- coll.set_array(np.ones(9))
- fig.canvas.draw()
- assert np.array_equal(coll.get_array(), np.ones(9))
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