praktikum-holons/src/psoAlgoCode/SimplePSO.java

package psoAlgoCode;

import java.util.Random;
import java.util.Vector;

import ui.controller.Control;
import ui.model.Model;

public class SimplePSO {

	// Random factors for calculations with "doubles"
	private double D1;
	private double D2;

	private boolean B1;
	private boolean B2;

	// New BPSO
	private double R1;
	private double R2;
	private double w;
	private double phi;
	private double c1;
	private double c2;
	private double rmu;

	// Function to be used
	private Function f;

	private int iterations;
	private Swarm swarm = new Swarm();
	private Random random = new Random();

	public SimplePSO(Model model, Control control, Coordinate<Vector<Object>> startPos) {
		iterations = 0;
		if (startPos == null) {
			Constants.setDimensions(10);
		} else {
			Constants.setDimensions(startPos.getCoords().size());
		}
		f = new Function();
	}

	/**
	 * Initiate the swarm with random values depending on the type of calculate
	 * (boolean or doubles)
	 */
	/*private void initSwarmRandom() {
		for (int i = 0; i < Constants.SWARM_SIZE; i++) {
			Particle p = new Particle(Constants.DIMENSIONS);
			Coordinate<Vector<Object>> tempPos = new Coordinate<Vector<Object>>();
			Coordinate<Vector<Object>> tempVel = new Coordinate<Vector<Object>>();
			for (int j = 0; j < Constants.DIMENSIONS; j++) {
				tempPos.setCoord(RandomFunctions.nextDoubles(1), j);
				tempVel.setCoord(RandomFunctions.nextDoubles(1), j);
			}
			p.setPositionAdv(tempPos);
			p.setVelocityAdv(tempVel);
			swarm.addMember(p);
		}
		initCoeff();
	}*/

	private void initSwarm(Coordinate<Vector<Object>> startPos) {
		for (int i = 0; i < Constants.SWARM_SIZE; i++) {
			Particle p = new Particle(Constants.DIMENSIONS);
			Coordinate<Vector<Object>> tempPos = new Coordinate<Vector<Object>>();
			Coordinate<Vector<Object>> tempVel = new Coordinate<Vector<Object>>();
			for (int j = 0; j < Constants.DIMENSIONS; j++) {
				int dim = startPos.getCoord(j).size();
				tempPos.setCoord(RandomFunctions.nextBoolean(dim), j);
				tempVel.setCoord(RandomFunctions.nextRandoms(dim), j);
			}
			p.setPositionAdv(tempPos);
			p.setVelocityAdv(tempVel);
			swarm.addMember(p);
		}
		initCoeff();
	}

	private void runFunction(Model model, Control control) {
		for (int i = 0; i < Constants.SWARM_SIZE; i++) {
			swarm.getSwarm().get(i).setActualValue(f.execute(swarm.getSwarm().get(i), i + 1, model, control));
		}
	}

	private void initCoeff() {
		// Coefficients for the calculation of velocity after S. Lee
		phi = Constants.PHI;
		rmu = Constants.RMU;
		w = 1 / ((phi - 1) + Math.sqrt(Math.pow(phi, 2) - 2 * phi));
		c1 = phi * w;
		c2 = c1;
	}

	public void caclSimplePSO(Model model, Control control, Coordinate<Vector<Object>> startPos) {
		initSwarm(startPos);
		runFunction(model, control);
		evaluate();

		while (iterations <= Constants.MAX_ITERATION) {
			for (int i = 0; i < Constants.SWARM_SIZE; i++) {
				Particle temp = swarm.getSwarm().get(i);

				// Binary PSO 2 (S. Lee)
				// Update Velocity
				temp.setVelocityAdv(updateNewVelAdv(temp.getVelocityAdv(), temp.getPositionAdv(),
						temp.getBestLocalPosAdv(), iterations));
				// Update Position
				temp.setPositionAdv(updateNewPosAdv(temp.getVelocityAdv(), temp.getPositionAdv()));
				// Mutation Position
				temp.setPositionAdv(mutatePos(temp.getPositionAdv()));
				// Decode Position
				temp.setPositionAdv(decodePos(temp.getPositionAdv()));

				//System.out.println("calculated centroid: " + swarm.calculateSwarmCentroid().toString());
				// Uncomment this two line and change the init of Vel to nextBoolean(dim) ->
				// binary PSO 1
				// temp.setVelocityAdv(updateVelAdv(temp.getVelocityAdv(),
				// temp.getPositionAdv(),
				// temp.getBestLocalPosAdv(), iterations));
				// temp.setPositionAdv(updatePosAdv(temp.getVelocityAdv(),
				// temp.getPositionAdv()));
			}
			// plotSwarm();
			iterations++;
			runFunction(model, control);
			evaluate();
		}
	}

/*	public void caclNextItSimplePSO(Model model, Control control, Coordinate<Vector<Object>> startPos) {
		initSwarm(startPos);
		runFunction(model, control);
		evaluate();
		for (int i = 0; i < Constants.SWARM_SIZE; i++) {
			Particle temp = swarm.getSwarm().get(i);
			// Update Velocity
			temp.setVelocityAdv(updateNewVelAdv(temp.getVelocityAdv(), temp.getPositionAdv(), temp.getBestLocalPosAdv(),
					iterations));
			// Update Position
			temp.setPositionAdv(updateNewPosAdv(temp.getVelocityAdv(), temp.getPositionAdv()));
			// Mutation Position
			temp.setPositionAdv(mutatePos(temp.getPositionAdv()));
			// Decode Position
			temp.setPositionAdv(decodePos(temp.getPositionAdv()));
		}
		System.out.println("calculated centroid: " + swarm.calculateSwarmCentroid().toString());

		evaluate();
		iterations++;
	}*/

	/**
	 * The boolean-based function to update the velocity of a particle depending on
	 * the inertia, social and cognitive factors. Here is important to consider the
	 * analogy of the operators.This calculation is based in the binary PSO version
	 * from S Lee.
	 * 
	 * @param vel
	 * @param pos
	 * @param bestLocal
	 * @param index
	 * @return
	 */
	private Coordinate<Vector<Object>> updateNewVelAdv(Coordinate<Vector<Object>> vel, Coordinate<Vector<Object>> pos,
			Coordinate<Vector<Object>> bestLocal, int index) {
		Coordinate<Vector<Object>> result = new Coordinate<Vector<Object>>();
		for (int dim = 0; dim < Constants.DIMENSIONS; dim++) {
			Vector<Object> newCoord = new Vector<Object>();
			R1 = Math.random();
			R2 = Math.random();
			for (int i = 0; i < vel.getCoord(dim).size(); i++) {
				if (pos.getCoord(dim).get(i).getClass().equals(Boolean.class)) {
					// Random coefficients for the calculation of velocity after S. Lee

					double value = 0.0;
					value = (w * (double) vel.getCoord(dim).get(i))
							+ (c1 * R1
									* (transformBoolToDouble((boolean) bestLocal.getCoord(dim).get(i))
											- transformBoolToDouble((boolean) pos.getCoord(dim).get(i))))
							+ (c2 * R2
									* (transformBoolToDouble(
											(boolean) swarm.getGlobalBest().getPositionAdv().getCoord(dim).get(i))
											- transformBoolToDouble((boolean) pos.getCoord(dim).get(i))));

					newCoord.add(i, value);

				} else if (vel.getCoord(dim).get(i).getClass().equals(Double.class)) {
					D1 = random.nextDouble();
					D2 = random.nextDouble();
					double value = 0.0;
					value = getOmega(index) * (double) vel.getCoord(dim).get(i)
							+ (Constants.ALPHA1 * D1
									* ((double) bestLocal.getCoord(dim).get(i) - (double) pos.getCoord(dim).get(i)))
							+ (Constants.ALPHA2 * D2
									* ((double) swarm.getGlobalBest().getPositionAdv().getCoord(dim).get(i)
											- (double) pos.getCoord(dim).get(i)));
					newCoord.add(i, value);
				}
			}
			result.setCoord(newCoord, dim);
		}
		return result;
	}

	/**
	 * The boolean-based function to update the position of a particle adding the
	 * current position with the new velocity (calculated in updateVel(Coordinates
	 * vel, Coordinates pos, Coordinates bestLocal, int i)). Here is important to
	 * consider the analogy of the operators. This calculation is based in the
	 * binary PSO version from S Lee.
	 * 
	 * @param vel
	 *            the updated velocity
	 * @param pos
	 *            the current position
	 * @return the updated position of the particle
	 */
	private Coordinate<Vector<Object>> updateNewPosAdv(Coordinate<Vector<Object>> vel, Coordinate<Vector<Object>> pos) {
		Coordinate<Vector<Object>> newPos = new Coordinate<Vector<Object>>();
		for (int dim = 0; dim < Constants.DIMENSIONS; dim++) {
			Vector<Object> newCoord = new Vector<Object>();
			for (int i = 0; i < vel.getCoord(dim).size(); i++) {
				if (pos.getCoord(dim).get(i).getClass().equals(Boolean.class)) {
					double value = 0.0;
					value = transformBoolToDouble((boolean) pos.getCoord(dim).get(i))
							+ (double) vel.getCoord(dim).get(i);
					newCoord.add(i, value);
				}
				if (pos.getCoord(dim).get(i).getClass().equals(Double.class)) {
					double value = 0.0;
					value = (double) pos.getCoord(dim).get(i) + (double) vel.getCoord(dim).get(i);
					newCoord.add(i, value);
				}
			}
			newPos.setCoord(newCoord, dim);
		}
		return newPos;
	}

	private Coordinate<Vector<Object>> mutatePos(Coordinate<Vector<Object>> pos) {
		Coordinate<Vector<Object>> newPos = new Coordinate<Vector<Object>>();
		for (int dim = 0; dim < Constants.DIMENSIONS; dim++) {
			Vector<Object> newCoord = new Vector<Object>();
			for (int i = 0; i < pos.getCoord(dim).size(); i++) {
				if (Math.random() < rmu) {
					newCoord.add(i, -(double) pos.getCoord(dim).get(i));
				} else {
					newCoord.add(i, (double) pos.getCoord(dim).get(i));
				}
			}
			newPos.setCoord(newCoord, dim);
		}
		return newPos;
	}

	private Coordinate<Vector<Object>> decodePos(Coordinate<Vector<Object>> pos) {
		Coordinate<Vector<Object>> newPos = new Coordinate<Vector<Object>>();
		for (int dim = 0; dim < Constants.DIMENSIONS; dim++) {
			Vector<Object> newCoord = new Vector<Object>();
			for (int i = 0; i < pos.getCoord(dim).size(); i++) {
				double decoder = sigmoid((double) pos.getCoord(dim).get(i));
				if (Math.random() >= decoder) {
					newCoord.add(i, true);
				} else {
					newCoord.add(i, false);
				}
			}
			newPos.setCoord(newCoord, dim);
		}
		return newPos;
	}

	private double sigmoid(double input) {
		double result = 0.0;
		result = 1 / (1 + Math.pow(Math.E, -input));
		return result;
	}

	private void evaluate() {
		swarm.updateLocalBestValues();
		// Update Global Best
		Particle temp_best = getBestValue();
		temp_best.updateLocalBest();
		if (iterations == 0) {
			swarm.setGlobalBest(temp_best);
		} else {
			swarm.updateGlobalBest(temp_best);
		}
		swarm.addEleToRecord(swarm.getGlobalBest().getLocalBestValue());
	}

	private double transformBoolToDouble(boolean input) {
		if (input == true) {
			return 1.0;
		} else {
			return 0.0;
		}
	}

	/**
	 * Calculation of binary XOR operator
	 * 
	 * @param b1
	 *            Boolean 1
	 * @param b2
	 *            Boolean 2
	 * @return b1 XOR b2
	 */
	private Boolean calcXOR(Boolean b1, Boolean b2) {
		Boolean result = false;
		result = (!b1 && b2) || (b1 && !b2);
		return result;
	}

	public Particle getBestValue() {
		Particle temp_particle = swarm.getSwarm().get(0);
		temp_particle.setActualValue(swarm.getSwarm().get(0).getActualValue());
		for (int i = 1; i < Constants.SWARM_SIZE; i++) {
			if (swarm.getSwarm().get(i).getActualValue() < temp_particle.getActualValue()) {
				temp_particle = swarm.getSwarm().get(i);
			}
		}
		return temp_particle;
	}

	public Vector<Double> getGBRecord() {
		return swarm.getGlobalBestRecord();
	}

	public Coordinate<Vector<Object>> getBestConfig() {
		Coordinate<Vector<Object>> result = new Coordinate<Vector<Object>>();
		result = swarm.getGlobalBest().getBestLocalPosAdv();
		return result;
	}

	public String getNameOfFunc() {
		return f.name;
	}

	/**
	 * Return the Omega depending the current iteration.
	 * 
	 * @param ite
	 * @return
	 */
	public double getOmega(int ite) {
		double newOmega = Constants.START_OMEGA - (Constants.DIFF_OMEGA * ite);
		return newOmega;
	}

	public int getIteration() {
		return iterations;
	}

	/*private Coordinate<Vector<Object>> updateVelAdv(Coordinate<Vector<Object>> vel, Coordinate<Vector<Object>> pos,
			Coordinate<Vector<Object>> bestLocal, int index) {
		Coordinate<Vector<Object>> result = new Coordinate<Vector<Object>>();
		for (int dim = 0; dim < Constants.DIMENSIONS; dim++) {
			Vector<Object> newCoord = new Vector<Object>();
			for (int i = 0; i < vel.getCoord(dim).size(); i++) {
				if (pos.getCoord(dim).get(i).getClass().equals(Boolean.class)) {
					boolean omega = random.nextBoolean();
					B1 = random.nextBoolean();
					B2 = random.nextBoolean();
					boolean value = true;

					value = (omega && (boolean) vel.getCoord(dim).get(i)) || (B1
							&& (calcXOR((boolean) bestLocal.getCoord(dim).get(i), (boolean) pos.getCoord(dim).get(i))))
							|| (B2 && (calcXOR((boolean) swarm.getGlobalBest().getPositionAdv().getCoord(dim).get(i),
									(boolean) pos.getCoord(dim).get(i))));
					newCoord.add(i, value);
				} else if (vel.getCoord(dim).get(i).getClass().equals(Double.class)) {
					D1 = random.nextDouble();
					D2 = random.nextDouble();
					double value = 0.0;
					value = getOmega(index) * (double) vel.getCoord(dim).get(i)
							+ (Constants.ALPHA1 * D1
									* ((double) bestLocal.getCoord(dim).get(i) - (double) pos.getCoord(dim).get(i)))
							+ (Constants.ALPHA2 * D2
									* ((double) swarm.getGlobalBest().getPositionAdv().getCoord(dim).get(i)
											- (double) pos.getCoord(dim).get(i)));
					newCoord.add(i, value);
				}
			}
			result.setCoord(newCoord, dim);
		}
		return result;
	}*/

	/*private Coordinate<Vector<Object>> updatePosAdv(Coordinate<Vector<Object>> vel, Coordinate<Vector<Object>> pos) {
		Coordinate<Vector<Object>> newPos = new Coordinate<Vector<Object>>();
		for (int dim = 0; dim < Constants.DIMENSIONS; dim++) {
			Vector<Object> newCoord = new Vector<Object>();
			for (int i = 0; i < vel.getCoord(dim).size(); i++) {
				if (pos.getCoord(dim).get(i).getClass().equals(Boolean.class)) {
					boolean value = false;
					value = calcXOR((boolean) pos.getCoord(dim).get(i), (boolean) vel.getCoord(dim).get(i));
					newCoord.add(i, value);
				}
				if (pos.getCoord(dim).get(i).getClass().equals(Double.class)) {
					double value = 0.0;
					value = (double) pos.getCoord(dim).get(i) + (double) vel.getCoord(dim).get(i);
					newCoord.add(i, value);
				}
			}
			newPos.setCoord(newCoord, dim);
		}
		return newPos;
	}*/

}