restructured

CertainTrust.py

@@ -1,5 +1,6 @@
 import numpy as np
 
+
 class Opinion:
     """
     This class represents opinion.

Evaluation.py

@@ -1,12 +1,11 @@
 from CertainTrust import Opinion
-from CSVReader import CSVReader
-from vendors.debian.DebianAdvisory import DebianAdvisory
+from vendors.debian.CSVReader import CSVReader
 
 class Evaluator:
     @staticmethod
     def evaluate_system(packagefile, months):
         '''
-        Evaluates a system, based on its packages and months to evaluate
+        Generates AND-opinion of a system, based on its package names and months
         :param packagefile: packages installed on the system
         :param months: for how many months the prediction is done
         :return: system evaluation
@@ -41,34 +40,3 @@ class Evaluator:
             fused_op = Opinion._internal_fusion(p_ops, weights)
             result_dict[p]=fused_op
         return result_dict
-
-    @staticmethod
-    def evaluate_expectation(package_list, vendormodel, months, norm_val):
-        """
-        TODO:
-        :param package_list: dictionary of opinions with names as key and opinion as value
-        :param vendormodel: the vendor-model to compare the prediction with
-        :return: TODO:
-        """
-        system_and = Opinion._cum_and(list(package_list.values()))
-        expectation = system_and.expectation_value()
-        prediction = (1-expectation)*(norm_val*months*30)
-        print("Mstar prediction = "+str(prediction))
-        summ = 0
-        for package in package_list:
-            #summ = sum(model.ge)
-            unified_package = DebianAdvisory.unifySrcName(package)
-            src2month = vendormodel.get_src2month()
-            if unified_package in src2month:
-                summ = summ + sum(src2month[package][-months-3:-3])
-
-
-        print("Src2month prediction = "+str(summ))
-        error = abs(summ - prediction)/summ
-        print("( "+str(months)+" , "+ str(norm_val) +" ) Error = "+str(error))
-
-
-'''
-print( Evaluator.fuse_models_equal_weights(CSVReader.readCSVModel(9),CSVReader.readCSVModel(12)))
-print(Evaluator.evaluate_system("inputs/dummy_input_package.csv", 9))
-'''

M-star.py

@@ -1,8 +1,6 @@
 import logging
 import sys
 
-from CSVReader import CSVReader
-from Evaluation import Evaluator
 from vendors.debian.DebianModel import DebianModel
 
 ##### GLOBAL VARIABLES #####
@@ -24,45 +22,27 @@ def aptsec_help():
     print('See manual for correct usage!')
 
 
-'''
-TODO:
-    - add parameterized extensions
-        - for input config_default.txt file
-        - for action
-        - vendors ( OPTIONAL )
-    
-'''
-
-
 def __main__(configfile='config_default.txt', vendorname='debian', action='help'):
     # support only debian
     if vendorname is 'debian':
         model = DebianModel(action)
 
-        ### generate test files ###
-        norm_param = 12
-        gen_dummy_model(3,norm_param)
-        gen_dummy_model(6,norm_param)
-        gen_dummy_model(9,norm_param)
-        gen_dummy_model(12,norm_param)
+        model.performTests()
 
+        #for norm_param in range(1, 15):
+        # get model as set of opinions
+        # TODO: FIX THE CVSREADER dependency
+        # TODO: for random subsets of packages (that exist in our model), generate prediction_error_values and compute the average error value for each of the three approaches: (addition from model , addition of separate predictions for opinions from a model, ANDed prediction)
 
 
+        """
+        # TEST AN INPUT AGAINST OUR MODEL
+        # read packages and create a set of opinions for those packages
+        
+        """
 
-        ### compute error
-        Evaluator.evaluate_expectation(CSVReader.read_csv_opinons(3), model, 3,norm_param)
-        Evaluator.evaluate_expectation(CSVReader.read_csv_opinons(6), model, 6,norm_param)
-        Evaluator.evaluate_expectation(CSVReader.read_csv_opinons(9), model, 9,norm_param)
-        Evaluator.evaluate_expectation(CSVReader.read_csv_opinons(12), model, 12,norm_param)
     else:
         print("Only debian vendors are supported for now.")
         sys.exit(1)
 
-def gen_dummy_model(month, norm_param):
-    res = CSVReader.read_csv_prediction_errorcompl(
-        "vendors/debian/inputs/dummy_input_package_prediction_errorcompl.csv", month, norm_param=norm_param)
-    with open('vendors/debian/models/dummy_model_' + str(month) + '.csv', 'w') as file:
-        for key in res:
-            file.write(key + ":" + str(res[key].t) + ":" + str(res[key].c) + ":" + str(res[key].f) + "\n")
-
 __main__(action='status')

vendors/VendorModel.py

@@ -1,3 +1,4 @@
+
 """
 All vendor models must extend this class.
 """
@@ -7,4 +8,13 @@ class VendorModel:
         raise NotImplementedError
 
     def get_vendor_dir(self):
-        raise NotImplementedError
+        raise NotImplementedError
+
+    def unifySrcName(self, name):
+        raise NotImplementedError
+
+    def gen_model_opinion_set(self, filename, month, norm_param):
+        raise NotImplementedError
+
+    def performTests(self):
+        raise NotImplementedError

CSVReader.py → vendors/debian/CSVReader.py

@@ -3,8 +3,11 @@ from CertainTrust import Opinion
 
 
 class CSVReader:
+
+    prediction_read = 0;
+
     @staticmethod
-    def read_csv_prediction_errorcompl(inputfile, months, f=0.5, norm_param=4):
+    def read_csv_prediction_errorcompl(inputfile, vendormodel, months, f=0.5, norm_param=4):
         '''
         Converts input csv file into a dictionary of opinions,
         The CSV input file should contain the following structure:
@@ -15,12 +18,15 @@ class CSVReader:
         :return: dictionary of package-names as key and opinions as value
         '''
         result = {}
+        summ = 0
         with open(inputfile, newline="") as csvfile:
             reader = csv.reader(csvfile, delimiter=':')
+
             for row in reader:
                 if not len(row) == 0:
-                    package = row [0]
+                    package = vendormodel.unifySrcName(row [0])
                     prediction = float(row [1])
+                    summ = summ + prediction
                     errorCompl = float(row [2])
                     resT = 1 - prediction / (30 * months * norm_param)
                     if len(row)==4:
@@ -29,6 +35,7 @@ class CSVReader:
                         result[package]=Opinion(resT, errorCompl, newf)
                     else:
                         result[package] = Opinion(resT, errorCompl, f)
+        CSVReader.prediction_read = summ
         return result
 
     @staticmethod

vendors/debian/DebianModel.py

@@ -10,6 +10,8 @@ from dateutil import parser
 from .DebianAdvisory import DebianAdvisory
 from .CVEParse import CVEParse
 from ..VendorModel import VendorModel
+from .CSVReader import CSVReader
+from .Tests import Tests
 
 class DebianModel(VendorModel):
     """
@@ -202,13 +204,6 @@ class DebianModel(VendorModel):
 
             self.cvetable[cve_id] = (finaldate, dsastats[1] - finaldate, cvestats[1], cvestats[2], cvestats[3])
 
-    @staticmethod
-    def print_help():
-        """
-        Prints help message to this vendor model.
-        """
-        print("Debian mstar model supports only update status and show actions.")
-
     def load_state(self):
         """
         Load state, different from DBs in that we always need it.
@@ -313,7 +308,6 @@ class DebianModel(VendorModel):
 
         self.format_data(srcpkg, cvestats, self.src2month, False)
 
-
     def format_data(self, pkg, cvestats, src2month, cvss):
         x = []
         y = []
@@ -374,7 +368,33 @@ class DebianModel(VendorModel):
 
         return
 
+    def unifySrcName(self, name):
+        return DebianAdvisory.unifySrcName(name)
 
+    def performTests(self):
+        Tests.input_prediction_error_test(self)
+
+    def gen_model_opinion_set(self, filename, month, norm_param):
+        """
+        Generates opinion set from the model input.
+        :param filename: model (package:prediction:errorcompl:f)
+        :param month: month parameter of the model
+        :param norm_param: normalization factor of the model
+        :return: dictionary of opinions
+        """
+        res = CSVReader.read_csv_prediction_errorcompl(filename, self, month, norm_param=norm_param)
+        # with open('vendors/debian/models/dummy_model_' + str(month) + '.csv', 'w') as file:
+        #    for key in res:
+        #        file.write(key + ":" + str(res[key].t) + ":" + str(res[key].c) + ":" + str(res[key].f) + "\n")
+        return res
+
+
+    @staticmethod
+    def print_help():
+        """
+        Prints help message to this vendor model.
+        """
+        print("Debian mstar model supports only update status and show actions.")
 
 
 

vendors/debian/Tests.py

@@ -0,0 +1,67 @@
+import os
+
+from CertainTrust import Opinion
+from vendors.debian.CSVReader import CSVReader
+
+class Tests:
+    @staticmethod
+    def input_prediction_error_test(model):
+        norm_param = 4
+
+        model_filename = os.path.join(model.module_path, "models", "dummy_input_package_prediction_errorcompl.csv")
+        model_set = model.gen_model_opinion_set(model_filename, 9, norm_param)
+
+        system_filename = os.path.join(model.module_path, "inputs", "dummy_input_package_server.csv")
+        system = CSVReader.read_csv_package_names(system_filename)
+
+        # get system dict
+        system_dict = dict()
+        for key in system:
+            print(key)
+            new_key = model.unifySrcName(key)
+            if new_key in model_set:
+                system_dict[new_key] = model_set[new_key]
+
+        print("Evaluating on: " + str(len(system_dict)) + " out of " + str(
+            len(system)) + " packages, since they are not present in our model.")
+
+        Tests.evaluate_expectation(system_dict, model, 9, norm_param)
+
+
+
+    @staticmethod
+    def evaluate_expectation(package_list, vendormodel, months, norm_val):
+        """
+        TODO:
+        :param package_list: dictionary of opinions with names as key and opinion as value
+        :param vendormodel: the vendor-model to compare the prediction with
+        :return: TODO:
+        """
+        print("For normalization value = " + str(norm_val))
+        # ANDed prediction
+        system_and = Opinion._cum_and(list(package_list.values()))
+        expectation = system_and.expectation_value()
+        AND_prediction = (1 - expectation) * (norm_val * months * 30)
+
+        # separate prediction
+        sep_pred = 0
+        for k in package_list:
+            sep_pred = sep_pred + ((1 - package_list[k].expectation_value()) * (norm_val * months * 30))
+
+        # src2month prediction gathering
+        summ = 0
+        for package in package_list:
+            unified_package = vendormodel.unifySrcName(package)
+            src2month = vendormodel.get_src2month()
+            if unified_package in src2month:
+                summ = summ + sum(src2month[package][-months - 3:-3])
+
+        file_error = abs(summ - CSVReader.prediction_read) / summ
+        print("Input file prediction = " + str(CSVReader.prediction_read) + ", ( error = " + str(file_error) + " )")
+
+        sep_error = abs(summ - sep_pred) / summ
+        print("Separate prediction = " + str(sep_pred) + ", ( error = " + str(sep_error) + " )")
+
+        and_error = abs(summ - AND_prediction) / summ
+        print("ANDed prediction = " + str(AND_prediction) + ", ( error = " + str(and_error) + " )")
+        print("Src2month data = " + str(summ))

vendors/debian/inputs/dummy_input_package.csv

@@ -0,0 +1,1417 @@
+a52dec
+aalib
+acl
+acpi
+acpi-support
+acpid
+adcli
+adduser
+adns
+adwaita-icon-theme
+alsa-base
+alsa-lib
+alsa-plugins
+alsa-tools
+alsa-utils
+alsamixergui
+anacron
+ant
+apache-pom
+apache2
+apparmor
+apr
+apr-util
+apt
+apt-file
+apt-listchanges
+apt-rdepends
+apt-src
+aptitude
+arandr
+armadillo
+arpack
+asm
+asn1crypto
+aspell
+aspell-en
+at
+at-spi2-atk
+at-spi2-core
+atk1.0
+atkmm1.6
+attr
+auctex
+audiofile
+audit
+autogen
+automat
+avahi
+babl
+base-files
+base-passwd
+bash
+bash-completion
+bc
+beautifulsoup
+beautifulsoup4
+biber
+bind9
+binfmt-support
+binutils
+blas
+blt
+bluez
+boost1.55
+boost1.62
+brlaser
+brltty
+bsd-finger
+bsd-mailx
+bsdmainutils
+bubblewrap
+build-essential
+busybox
+bzip2
+c-ares
+ca-certificates
+ca-certificates-java
+cairo
+cairomm
+cdebconf
+cdparanoia
+cglib
+cgmanager
+chardet
+charls
+chromaprint
+#chromium-browser
+cifs-utils
+clipit
+cloog
+clp
+clucene-core
+clutter-1.0
+clutter-gtk
+cogl
+coinmp
+coinor-cbc
+coinor-cgl
+coinor-osi
+coinutils
+colord
+commons-beanutils
+commons-httpclient
+commons-parent
+configparser
+console-common
+console-data
+console-setup
+constantly
+coreutils
+cpio
+cracklib2
+crda
+cron
+cross-binutils
+cryptsetup
+crystalhd
+cups
+cups-filters
+cups-pdf
+cups-pk-helper
+curl
+cwidget
+cyrus-sasl2
+d-conf
+dash
+db-defaults
+db5.3
+dbus
+dbus-glib
+dbus-python
+dconf-editor
+debconf
+debian-archive-keyring
+debian-faq
+debian-keyring
+debianutils
+deluge
+desktop-base
+desktop-file-utils
+device-tree-compiler
+dh-python
+dia
+dia-shapes
+dialog
+dictionaries-common
+diffutils
+ding-libs
+directfb
+dirmngr
+distro-info-data
+djvulibre
+dkms
+dmidecode
+dnspython
+doc-debian
+docbook-xml
+docopt
+dosfstools
+dotconf
+double-conversion
+dpkg
+e2fsprogs
+easymock
+eclipse
+ed
+eject
+elfutils
+emacs24
+emacsen-common
+enca
+enchant
+enum34
+esound
+espeak
+ethtool
+evince
+evolution
+evolution-data-server
+evolution-ews
+exim4
+expat
+faad2
+fakeroot
+farstream-0.2
+fastjar
+felix-bundlerepository
+felix-gogo-command
+felix-gogo-runtime
+felix-gogo-shell
+fetchmail
+ffmpeg
+fftw3
+file
+findutils
+firebird2.5
+firebird3.0
+#firefox-esr
+firmware-free
+firmware-nonfree
+flac
+flask
+flite
+fltk1.1
+fluidsynth
+fontconfig
+fonts-adf
+fonts-android
+fonts-arphic-gbsn00lp
+fonts-arphic-gkai00mp
+fonts-cabin
+fonts-comfortaa
+fonts-croscore
+fonts-crosextra-caladea
+fonts-crosextra-carlito
+fonts-dejavu
+fonts-ebgaramond
+fonts-font-awesome
+fonts-freefont
+fonts-gfs-artemisia
+fonts-gfs-baskerville
+fonts-gfs-complutum
+fonts-gfs-didot
+fonts-gfs-neohellenic
+fonts-gfs-olga
+fonts-gfs-porson
+fonts-gfs-solomos
+fonts-junicode
+fonts-lato
+fonts-liberation
+fonts-linuxlibertine
+fonts-lobstertwo
+fonts-noto
+fonts-oflb-asana-math
+fonts-roboto
+fonts-sil-gentium
+fonts-sil-gentium-basic
+fonts-sil-gentiumplus
+fonts-sil-gentiumplus-compact
+fonts-stix
+freetype
+freexl
+fribidi
+fuse
+fxload
+fyba
+galculator
+game-music-emu
+gawk
+gcc-4.8
+gcc-4.9
+gcc-6
+gcc-7
+gcc-defaults
+gconf
+gcr
+gdal
+gdbm
+gdcm
+gdisk
+gdk-pixbuf
+gegl
+geoclue-2.0
+geocode-glib
+geoip
+geoip-database
+geos
+gettext
+ghostscript
+giblib
+giflib
+gimp
+git
+gksu
+gl2ps
+glew
+glib-networking
+glib2.0
+glibc
+glibmm2.4
+gmime
+gmp
+gmtk
+gnome-autoar
+gnome-desktop3
+gnome-disk-utility
+gnome-icon-theme
+gnome-icon-theme-symbolic
+gnome-keyring
+gnome-mime-data
+gnome-mplayer
+gnome-online-accounts
+gnome-orca
+gnome-screenshot
+gnome-settings-daemon
+gnome-system-tools
+gnome-themes
+gnome-themes-standard
+gnome-vfs
+gnupg
+gnupg2
+gnutls28
+gobject-introspection
+google-perftools
+gparted
+gpgme1.0
+gpicview
+gpm
+graphite2
+grep
+grip
+groff
+grub2
+gsettings-desktop-schemas
+gsfonts
+gsfonts-x11
+gsl
+gsoap
+gssdp
+gst-plugins-bad1.0
+gst-plugins-base1.0
+gst-plugins-good1.0
+gstreamer-vaapi
+gstreamer1.0
+gtk+2.0
+gtk+3.0
+gtk2-engines
+gtkmm2.4
+gtkspell
+gtkspell3
+gucharmap
+gupnp
+gupnp-igd
+gutenprint
+gvfs
+gzip
+h5py
+harfbuzz
+hashdeep
+hdf5
+heimdal
+hicolor-icon-theme
+highlight.js
+hostname
+hplip
+htop
+http-parser
+hunspell
+hunspell-en-us
+hwloc
+hyperlink
+hyphen
+iceweasel
+icu
+icu4j-49
+ifupdown
+ijs
+ilmbase
+#imagemagick
+imlib2
+incremental
+infinipath-psm
+init-system-helpers
+initramfs-tools
+inkscape
+insserv
+intel-microcode
+intel-vaapi-driver
+iproute2
+iptables
+iputils
+ipxe
+ipython
+ipython-genutils
+irqbalance
+isc-dhcp
+isl
+iso-codes
+ispell
+iucode-tool
+iw
+jackd2
+jansson
+jasper
+java-atk-wrapper
+java-common
+javascript-common
+javatools
+jbig2dec
+jbigkit
+jemalloc
+jetty8
+jigit
+jimtcl
+jinja2
+jq
+jquery
+jqueryui
+jsch
+json-c
+json-glib
+junit
+junit4
+jupyter-core
+jzlib
+kauth
+kbd
+kerberos-configs
+keybinder
+keyutils
+klibc
+kmod
+krb5
+kservice
+lame
+lapack
+laptop-detect
+latexmk
+lcms2
+ldb
+leafpad
+leptonlib
+less
+libaacs
+libabw
+libaec
+libaio
+libalgorithm-c3-perl
+libalgorithm-diff-perl
+libalgorithm-diff-xs-perl
+libalgorithm-merge-perl
+libao
+libapache-dbi-perl
+libapache2-mod-perl2
+libappindicator
+libapt-pkg-perl
+#libarchive
+libarchive-extract-perl
+libart-lgpl
+libass
+libassuan
+libasyncns
+libatasmart
+libauthen-sasl-perl
+libautovivification-perl
+libav
+libavc1394
+libb-hooks-endofscope-perl
+libblockdev
+libbluray
+libbonobo
+libbs2b
+libbsd
+libburn
+libbusiness-isbn-data-perl
+libbusiness-isbn-perl
+libbusiness-ismn-perl
+libbusiness-issn-perl
+libcaca
+libcacard
+libcairo-perl
+libcanberra
+libcap-ng
+libcap2
+libcdio
+libcdr
+libcgi-fast-perl
+libcgi-pm-perl
+libchamplain
+libclass-accessor-perl
+libclass-c3-perl
+libclass-c3-xs-perl
+libclass-data-inheritable-perl
+libclass-factory-util-perl
+libclass-inspector-perl
+libclass-isa-perl
+libclass-method-modifiers-perl
+libclass-singleton-perl
+libcmis
+libcommons-cli-java
+libcommons-codec-java
+libcommons-collections3-java
+libcommons-logging-java
+libcpan-meta-perl
+libcroco
+libcryptui
+libdaemon
+libdap
+libdata-compare-perl
+libdata-dump-perl
+libdata-optlist-perl
+libdata-section-perl
+libdata-uniqid-perl
+libdate-simple-perl
+libdatetime-calendar-julian-perl
+libdatetime-format-builder-perl
+libdatetime-format-strptime-perl
+libdatetime-locale-perl
+libdatetime-perl
+libdatetime-timezone-perl
+libdatrie
+libdbd-mysql-perl
+libdbd-sqlite3-perl
+libdbi
+libdbi-drivers
+libdbi-perl
+libdbusmenu
+libdc1394-22
+libdca
+libde265
+libdevel-stacktrace-perl
+libdevel-symdump-perl
+libdigest-md5-file-perl
+libdrm
+libdv
+libdvdnav
+libdvdread
+libe-book
+libedit
+libelf
+libencode-eucjpms-perl
+libencode-hanextra-perl
+libencode-jis2k-perl
+libencode-locale-perl
+libeot
+libepoxy
+libepsilon
+libept
+liberror-perl
+libestr
+libetonyek
+libeval-closure-perl
+libevdev
+libevent
+libexception-class-perl
+libexif
+libexporter-tiny-perl
+libexttextcat
+libfabric
+libfastjson
+libfcgi-perl
+libffi
+libfile-basedir-perl
+libfile-copy-recursive-perl
+libfile-desktopentry-perl
+libfile-fcntllock-perl
+libfile-find-rule-perl
+libfile-listing-perl
+libfile-mimeinfo-perl
+libfile-sharedir-perl
+libfile-slurp-perl
+libfile-slurp-tiny-perl
+libfile-slurp-unicode-perl
+libfixbuf
+libfm
+libfont-afm-perl
+libfontenc
+libfreehand
+libgadu
+libgc
+libgcrypt20
+libgd2
+libgda5
+libgdata
+libgeotiff-dfsg
+libgksu
+libglade2
+libglib-perl
+libgltf
+libglu
+libglvnd
+libgnome
+libgnome-keyring
+libgpg-error
+libgphoto2
+libgsm
+libgssglue
+libgtk2-perl
+libgtop2
+libgudev
+libgusb
+libgweather
+libgxps
+libhamcrest-java
+libhdf4
+libhtml-form-perl
+libhtml-format-perl
+libhtml-parser-perl
+libhtml-tagset-perl
+libhtml-template-perl
+libhtml-tree-perl
+libhttp-cookies-perl
+libhttp-daemon-perl
+libhttp-date-perl
+libhttp-message-perl
+libhttp-negotiate-perl
+libibverbs
+libical
+libice
+libid3tag
+libidn
+libidn2-0
+libiec61883
+libieee1284
+libimobiledevice
+libindicator
+libinput
+libio-html-perl
+libio-socket-ssl-perl
+libio-string-perl
+libipc-run3-perl
+libipc-system-simple-perl
+libisoburn
+libisofs
+libjpeg-turbo
+libjsoncpp
+libkate
+libkml
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vendors/debian/inputs/dummy_input_package_server.csv

@@ -0,0 +1,843 @@
+accountsservice
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vendors/debian/models/dummy_model_12.csv

@@ -1,1252 +0,0 @@
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@@ -1,1252 +0,0 @@
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